Optimizing testing for COVID-19 in India.

TitleOptimizing testing for COVID-19 in India.
Publication TypeJournal Article
Year of Publication2021
AuthorsCherian P, Krishna S, Menon GI
JournalPLoS Comput Biol
Volume17
Issue7
Paginatione1009126
Date Published2021 Jul
ISSN1553-7358
KeywordsAntigens, Viral, Computational Biology, COVID-19, COVID-19 Testing, Humans, India, Models, Statistical, Point-of-Care Testing, Reverse Transcriptase Polymerase Chain Reaction, SARS-CoV-2, Sensitivity and Specificity
Abstract

COVID-19 testing across India uses a mix of two types of tests. Rapid Antigen Tests (RATs) are relatively inexpensive point-of-care lateral-flow-assay tests, but they are also less sensitive. The reverse-transcriptase polymerase-chain-reaction (RT-PCR) test has close to 100% sensitivity and specificity in a laboratory setting, but delays in returning results, as well as increased costs relative to RATs, may vitiate this advantage. India-wide, about 49% of COVID-19 tests are RATs, but some Indian states, including the large states of Uttar Pradesh (pop. 227.9 million) and Bihar (pop. 121.3 million) use a much higher proportion of such tests. Here we show, using simulations based on epidemiological network models, that the judicious use of RATs can yield epidemiological outcomes comparable to those obtained through RT-PCR-based testing and isolation of positives, provided a few conditions are met. These are (a) that RAT test sensitivity is not too low, (b) that a reasonably large fraction of the population, of order 0.5% per day, can be tested, (c) that those testing positive are isolated for a sufficient duration, and that (d) testing is accompanied by other non-pharmaceutical interventions for increased effectiveness. We assess optimal testing regimes, taking into account test sensitivity and specificity, background seroprevalence and current test pricing. We find, surprisingly, that even 100% RAT test regimes should be acceptable, from both an epidemiological as well as a economic standpoint, provided the conditions outlined above are met.

DOI10.1371/journal.pcbi.1009126
Alternate JournalPLoS Comput Biol
PubMed ID34292931
PubMed Central IDPMC8297905
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