Lab Members

Postdocs

Yoshiya Matsubara

Sruthi Balakrishnan

PhD Students

Mathias Heltberg

Vaibhhav Sinha

Jonas Juul

Postdoc Alumni

• Ishita Sengupta
• Paromita Saha
• Monisha Bhattacharya

Graduated Students

• 2019. Akshit Goyal. Thesis title: Mathematical models of diversity, multistability and metabolic cooperation in microbial populations.
• 2019. Vishaka Datta. Thesis title: Inferring protein-DNA binding events using CHIP-seq read counts.
• 2018. Rohit Suratekar (co-supervised with Raghu Padinjat at NCBS, Bangalore.) Thesis title: Understanding the structure and dynamics of Drosophila PIP2 cycle with mathematical modelling.
• 2012. Lykke Pedersen (co-supervised with Mogens Jensen at NBI, Copenhagen.) Thesis title: Biological systems on a small scale.
• 2011. Benedicte Mengel (co-supervised with Mogens Jensen at NBI, Copenhagen.) Thesis title: Modeling Interaction Patterns at the Level of Proteins, Cells and Humans.
• 2010. Alexander Hunziker (co-supervised with Kim Sneppen at NBI, Copenhagen.) Thesis title: Sense & Sensitivity - Regulation of Genes in Good and Bad Times.
• 2009. Mikkel Avlund (co-supervised with Kim Sneppen at NBI, Copenhagen.) Thesis title: Dynamics of growth – decisions in phages and gene segregation in bacteria.

• 201?. Jonas Juul (co-supervised with Mogens Jensen at NBI, Copenhagen.)
• 2009. Rasmus H. Rasmussen (co-supervised with Jesper Ferkinghoff-Borg at NBI, Copenhagen.) Thesis title: Phase space reduction for biochemical networks.
• 2009. Jesper Fonslet (co-supervised with Mogens Jensen and Jesper Ferkinghoff-Borg at NBI, Copenhagen.) Thesis title: Amyloid growth kinetics.
• 2008. Peter B. Jensen (co-supervised with Mogens Jensen at NBI, Copenhagen.) Thesis title: Modeling oscillatory gene expressions in Wnt and Notch.
• 2007. Benedicte Mengel (co-supervised with Mogens Jensen at NBI, Copenhagen.) Thesis title: Modelling genetic regulation in the NF-κB signalling system.

• 2007. Tine Straasø (co-supervised with Mogens Jensen and Kim Sneppen at NBI, Copenhagen.) Thesis title: Modelling genetic regulation in the NF-κB signalling system.
• 2006. Kristian Ruud Petersen and Jesper Fonslet (co-supervised with Mogens Jensen at NBI, Copenhagen.) Thesis title: Pulses and chaos in NF-kB oscillations.

• 2006. Kamilla Nørregaard, Mette Fløistrup, Jørgen Skancke and Andreas Skielboe (at NBI, Copenhagen) Thesis title: Modelling the SOS response to DNA damage in E. coli.